The detailed information of tRNA gene sequence


Sequence ID>WENV170651640
Genome IDJRYG01000101
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1320
End posion on genome 1395
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tccggtttgc
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCCTGCTTTGCAAGCAGGAGGTCGTCGGTTCGATC
CCGTCTGGCTCCACCA
Downstream region at tRNA end position 
ccatcaaccg
Secondary structure (Cloverleaf model)
>WENV170651640	Ala	TGC
                   c      ACCA ccatcaaccg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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