The detailed information of tRNA gene sequence


Sequence ID>WENV170651650
Genome IDJRYG01000181
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3612
End posion on genome 3701
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgctcttcc
tRNA gene sequence 
GGAGAGGTGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTTTAGGTGAAAGCCTA
ACGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
atagctctat
Secondary structure (Cloverleaf model)
>WENV170651650	Ser	GGA
                   c      GCCA atagctctat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TTTAGGTGAAAGCCTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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