The detailed information of tRNA gene sequence


Sequence ID>WENV170651658
Genome IDJRYG01000281
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3819
End posion on genome 3908
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggtttcccac
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGTCGAACGGGGCGGTCTCGAAAACCGTTGTACGCGCAAGCGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
agaatgcttg
Secondary structure (Cloverleaf model)
>WENV170651658	Ser	CGA
                   c      GCCA agaatgcttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTACGCGCAAGCGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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