The detailed information of tRNA gene sequence


Sequence ID>WENV170651673
Genome IDJRYG01000373
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 28531
End posion on genome 28440
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccccgcagac
tRNA gene sequence 
GGAAGGAATCGTTCCCCGGTGGGGCGGCCGGTCTTCAAAACCGGCAGGGCTTGTCAGACA
AGCCTTGGTAGGTTCGACTCCTGCTTCCTTCCgcc
Downstream region at tRNA end position 
aaacctttcc
Secondary structure (Cloverleaf model)
>WENV170651673	SeC(p)	TCA
                   c      Cgcc aaacctttcc
                     G - C
                     G + T
                     A - T
                     A   C
                     G - C
                     G + T
                     A - T          T C
                    A     C G T C C     A
      C C C        T      | + | | |     G
    C       T T G C       G T A G G     C
    G       + + | |                 T T
    G       G G C G
      T G G        G     CAGGGCTTGTCAGACAAGCCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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