The detailed information of tRNA gene sequence


Sequence ID>WENV170651688
Genome IDJRYG01000503
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 11966
End posion on genome 11877
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcatttgact
tRNA gene sequence 
GGAGATGTGCCGGAGCGGTTGATCGGGCTTGACTCGAAATCAAGTGTACTCGCAAGGGTA
CCGGGGGTTCGAATCCCTCCATCTCCGCAA
Downstream region at tRNA end position 
gttcgatcct
Secondary structure (Cloverleaf model)
>WENV170651688	Ser	CGA
                   t      GCAA gttcgatcct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TGTACTCGCAAGGGTACC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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