The detailed information of tRNA gene sequence


Sequence ID>WENV170651690
Genome IDJRYG01000513
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 29909
End posion on genome 29985
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttaattgtgt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACCTGCATGGGGTGCAGGGGGTCGGAAGTTCGAA
TCTTCTCGCCCCGACCA
Downstream region at tRNA end position 
tctagattcc
Secondary structure (Cloverleaf model)
>WENV170651690	Pro	GGG
                   t      ACCA tctagattcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T T C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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