The detailed information of tRNA gene sequence


Sequence ID>WENV170651705
Genome IDJRYG01000640
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 15674
End posion on genome 15750
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gttcgacagc
tRNA gene sequence 
CTGCCCGTAGCTCAATTGGATAGAGCACCAGCCTTCTAAGCTGGGGGTTACAGGTTCGAT
CCCTGTCGGGCAGGCCA
Downstream region at tRNA end position 
agcggctgat
Secondary structure (Cloverleaf model)
>WENV170651705	Arg	TCT
                   c      GCCA agcggctgat
                     C - G
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C T
                    T     T G T C C     A
      T A A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTT
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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