The detailed information of tRNA gene sequence


Sequence ID>WENV170651718
Genome IDJRYG01000823
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 80114
End posion on genome 80190
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcgccctcct
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCGCTTGCTTTGGGAGCAAGATGTCGGGGGTTCAAA
TCCCTCCACCCCGACCA
Downstream region at tRNA end position 
gagtgctcgc
Secondary structure (Cloverleaf model)
>WENV170651718	Pro	TGG
                   t      ACCA gagtgctcgc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    C       C G C G       G G G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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