The detailed information of tRNA gene sequence


Sequence ID>WENV170651722
Genome IDJRYG01000874
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 16783
End posion on genome 16710
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagcccaccc
tRNA gene sequence 
GGGCCAGTAGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGTAGGTCGAAGGTTCGAG
TCCTTCCTGGCCCAtgc
Downstream region at tRNA end position 
cccggtcgcc
Secondary structure (Cloverleaf model)
>WENV170651722	Met	CAT
                   c      Atgc cccggtcgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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