The detailed information of tRNA gene sequence


Sequence ID>WENV170651731
Genome IDJRYG01001065
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 30798
End posion on genome 30722
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaccgccccc
tRNA gene sequence 
GGGGTGCTAGCTCAATTTGGCAGAGCAGCGGCCTCCAAAGCCGAAGGTTCCAGGTTCGAG
TCCTGGGCGCCCCGCCT
Downstream region at tRNA end position 
cccggatagt
Secondary structure (Cloverleaf model)
>WENV170651731	Trp	CCA
                   c      GCCT cccggatagt
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     C - G          T G
                    T     G G T C C     A
      T A A        A      | | | | |     G
    T       C T C G       C C A G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     AGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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