The detailed information of tRNA gene sequence


Sequence ID>WENV170651737
Genome IDJRYG01001130
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 42452
End posion on genome 42376
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccgcatcggt
tRNA gene sequence 
CGGGGAGTAGCTCAGCCTGGTAGAGCACTGTCTTCGGGAGGCAGGGGCCGGAGGTTCGAA
TCCTCTTTCCCCGACCA
Downstream region at tRNA end position 
attttcttca
Secondary structure (Cloverleaf model)
>WENV170651737	Pro	CGG
                   t      ACCA attttcttca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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