The detailed information of tRNA gene sequence


Sequence ID>WENV170651741
Genome IDJRYG01001267
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 33030
End posion on genome 33125
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttctatgaac
tRNA gene sequence 
GGAAGAGATCGTTCCCCGGTGGGGCGCCCGGTCTTCAAAACCGGGAGGGGCCGTCAGACG
GTCCCTGGTGGGTTCGACTCCCACTCTCTTCCGCCA
Downstream region at tRNA end position 
cttgtgtcac
Secondary structure (Cloverleaf model)
>WENV170651741	SeC(p)	TCA
                   c      GCCA cttgtgtcac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    T     C A C C C     A
      C C C        C      | | | | |     G
    G       C T T G       G T G G G     C
    G       | +                     T T
    T       G G C G
      G G          C     GAGGGGCCGTCAGACGGTCCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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