The detailed information of tRNA gene sequence


Sequence ID>WENV170651743
Genome IDJRYG01001269
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 31915
End posion on genome 31839
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cgcagcattt
tRNA gene sequence 
CGGGGTGTAGCTCAGCCTGGTAGAGTACTACGTTCGGGACGTAGGAGTCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
gttttaaaaa
Secondary structure (Cloverleaf model)
>WENV170651743	Pro	CGG
                   t      ACCA gttttaaaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | +                 T T
    G       G A G T
      G T A        A     GAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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