The detailed information of tRNA gene sequence


Sequence ID>WENV170651759
Genome IDJRYG01001827
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 7160
End posion on genome 7068
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acctggatac
tRNA gene sequence 
GGAGACGTGGCCGAGAGGTCGAAGGCACTCCCCTGCTAAGGGAGCATGCGGGCAAAACCT
GCATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gtaaaatgct
Secondary structure (Cloverleaf model)
>WENV170651759	Ser	GCT
                   c      GCCA gtaaaatgct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CATGCGGGCAAAACCTGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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