The detailed information of tRNA gene sequence


Sequence ID>WENV170651770
Genome IDJRYG01002176
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 28783
End posion on genome 28708
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gcgccggaat
tRNA gene sequence 
GCCGGCATAGCTCAGTTGGTAGAGCAACCGCCTTGTAAGCGGTAGGTCGTCTGTTCGAGT
CAGACTGTCGGCACCA
Downstream region at tRNA end position 
gcttccgcct
Secondary structure (Cloverleaf model)
>WENV170651770	Thr	TGT
                   t      ACCA gcttccgcct
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     C - G
                     A - T          T G
                    T     C A G A C     A
      T G A        A      | | | | |     G
    T       C T C G       G T C T G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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