The detailed information of tRNA gene sequence


Sequence ID>WENV170651776
Genome IDJRYG01002505
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 17310
End posion on genome 17221
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcgcgccctc
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGTCGATCGGGGCGGTCTCGAAAACCGTTGTACTCGCGAGAGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ggattgaatt
Secondary structure (Cloverleaf model)
>WENV170651776	Ser	CGA
                   c      GCCA ggattgaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      C G A        G     TGTACTCGCGAGAGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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