The detailed information of tRNA gene sequence


Sequence ID>WENV170651783
Genome IDJRYG01002848
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 10301
End posion on genome 10387
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gcccctcgct
tRNA gene sequence 
GCGGCGGTGGCGAAATTGGTAGACGCAACAGGTTTAGGTCCTGTCGGTCGCAAGACTGTG
GAGGTTCGAGTCCTCTCCGCCGCACCA
Downstream region at tRNA end position 
ccgccctcgt
Secondary structure (Cloverleaf model)
>WENV170651783	Leu	TAG
                   t      ACCA ccgccctcgt
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       A G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGTCGCAAGACTGT
                    A - T
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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