The detailed information of tRNA gene sequence


Sequence ID>WENV170651793
Genome IDJRYG01003232
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2440
End posion on genome 2513
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tccgcctcct
tRNA gene sequence 
GCCCGGCTAGCTCAATTGGCTAGAGCACCTGTCTTGTAAACAGGAGGTTTCCGGTTCGAC
CCCGGAGCCGGGCTttc
Downstream region at tRNA end position 
gcgtcacctc
Secondary structure (Cloverleaf model)
>WENV170651793	Thr	TGT
                   t      Tttc gcgtcacctc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G          C C
                    T     A G G C C     A
      T A A        A      | | | | |     G
    T       C T C G       T C C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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