The detailed information of tRNA gene sequence


Sequence ID>WENV170651813
Genome IDJRYG01003897
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 12270
End posion on genome 12198
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tagccgacgc
tRNA gene sequence 
GGGGCTATAGCTCAGTTGGCAGAGCGCTTGGATCGCACCCAAGAGGTCGCCGGTTCGACT
CCGGCTAGCTCCAtcc
Downstream region at tRNA end position 
atccatccat
Secondary structure (Cloverleaf model)
>WENV170651813	Ala	CGC
                   c      Atcc atccatccat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T C
                    T     C G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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