The detailed information of tRNA gene sequence


Sequence ID>WENV170651817
Genome IDJRYG01004296
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 12158
End posion on genome 12082
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaaattttt
tRNA gene sequence 
GCCGGGGTAGCTCAGCTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCGAG
TCCCTCCCCCGGTACCT
Downstream region at tRNA end position 
ctcccatcgc
Secondary structure (Cloverleaf model)
>WENV170651817	Met	CAT
                   t      ACCT ctcccatcgc
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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