The detailed information of tRNA gene sequence


Sequence ID>WENV170651835
Genome IDJRYG01005879
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 7393
End posion on genome 7301
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgattctccc
tRNA gene sequence 
GGAGAGGTACCGAAGCGGTCATAACGGCGCCGACTCGAAATCGGATGGGGGCCTAACCGC
CCCACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aatcagcggg
Secondary structure (Cloverleaf model)
>WENV170651835	Ser	CGA
                   c      GCCA aatcagcggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          C     TGGGGGCCTAACCGCCCCAC
                    G   A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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