The detailed information of tRNA gene sequence


Sequence ID>WENV170651836
Genome IDJRYG01005890
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1570
End posion on genome 1495
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttgcaaat
tRNA gene sequence 
CGCGGGATGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCAAGT
CCTTCTCCCGCTACGA
Downstream region at tRNA end position 
aggttcatcc
Secondary structure (Cloverleaf model)
>WENV170651836	Met	CAT
                   t      ACGA aggttcatcc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C T T C C     A
      T G A        G      | | | | |     A
    T       C G A G       G A A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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