The detailed information of tRNA gene sequence


Sequence ID>WENV170651879
Genome IDJRYG01009739
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 4259
End posion on genome 4184
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cgccaatccc
tRNA gene sequence 
GCTCCCTTCGTCTAGTGGCCCAGGACACCGCCCTCTCACGGCGGGAACAGGGGTTCGAAA
CCCCTAGGGAGCGCCA
Downstream region at tRNA end position 
gtcgatgcaa
Secondary structure (Cloverleaf model)
>WENV170651879	Glu	CTC
                   c      GCCA gtcgatgcaa
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          A A
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        A     GAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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