The detailed information of tRNA gene sequence


Sequence ID>WENV170651889
Genome IDJRYG01010927
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 115
End posion on genome 28
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tactgatccg
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTTGATCGGGGCGCTCTCGAAAAGCGTTGTGGCCGCGAGGTCA
CCGTGGGTTCGAATCCCACCCTCTCCGCtc
Downstream region at tRNA end position 
ttgaaggatg
Secondary structure (Cloverleaf model)
>WENV170651889	Ser	CGA
                   g      GCtc ttgaaggatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       +   | |                 T T
    T       T C G G
      T G A        G     TGTGGCCGCGAGGTCACC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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