The detailed information of tRNA gene sequence


Sequence ID>WENV170651894
Genome IDJRYG01011609
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1155
End posion on genome 1229
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cacggccaac
tRNA gene sequence 
GCTCCCTTCGTCTATCGGTTAGGACGCGAGATTTTCAATCTTGAAAGACGGGTTCGACTC
CCGTAGGGAGCGCCA
Downstream region at tRNA end position 
cgctgtaggt
Secondary structure (Cloverleaf model)
>WENV170651894	Glu	TTC
                   c      GCCA cgctgtaggt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T C
                    T     T G C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    G + T
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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