The detailed information of tRNA gene sequence


Sequence ID>WENV170651902
Genome IDJRYG01012252
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3128
End posion on genome 3038
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcctccaat
tRNA gene sequence 
GGGGAGGTGCCAGAGAGGTCGATTGGGGCCGCCTGCTAAGCGGTTACCGGGCTTAAAACT
CGGTCATGGGTTCGAATCCCATCCTCCCCGCtc
Downstream region at tRNA end position 
cacgctcacg
Secondary structure (Cloverleaf model)
>WENV170651902	Ser	GCT
                   t      GCtc cacgctcacg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      A G A        G      | | | | |     G
    G       G A C C       A T G G G     C
    G       + | | |                 T T
    T       T T G G
      C G A        G     TACCGGGCTTAAAACTCGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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