The detailed information of tRNA gene sequence


Sequence ID>WENV170651911
Genome IDJRYG01012815
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2306
End posion on genome 2395
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgacatccc
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTCGAAGGCGCAGCACTGGAAATGCTGTTTAGGGGTAACTCTA
ACGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aatttcccag
Secondary structure (Cloverleaf model)
>WENV170651911	Ser	GGA
                   c      GCCA aatttcccag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TTTAGGGGTAACTCTAAC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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