The detailed information of tRNA gene sequence


Sequence ID>WENV170651920
Genome IDJRYG01014985
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 392
End posion on genome 303
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtcgcccgcT
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCATCGGGGAAACCCGG
TCGAGGGTTCGAATCCCTCCCCCTCCGTCg
Downstream region at tRNA end position 
cccggctccg
Secondary structure (Cloverleaf model)
>WENV170651920	Ser	TGA
                   T      GTCg cccggctccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CATCGGGGAAACCCGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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