The detailed information of tRNA gene sequence


Sequence ID>WENV170651935
Genome IDJRYG01017757
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 870
End posion on genome 795
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
nncgttttta
tRNA gene sequence 
GGGCGTGTAGCTCAGCTGGGAGAGCGCCGCGTTCGCAATGCGGAGGCCAGGAGTTCGATC
CTCCTCACGTCCATCA
Downstream region at tRNA end position 
gaattgaaaa
Secondary structure (Cloverleaf model)
>WENV170651935	Ala	CGC
                   a      ATCA gaattgaaaa
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     T - A
                     G - C          C T
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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