The detailed information of tRNA gene sequence


Sequence ID>WENV170651939
Genome IDJRYG01018345
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 463
End posion on genome 388
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cctatggtgc
tRNA gene sequence 
GGGGGTGTAGCTCAGCGGTTAGAGCAGCGGGCTCATAACCTGTTGGTCGCTGGTTCGATC
CCAGCCACCCACACCA
Downstream region at tRNA end position 
ttgacacgtc
Secondary structure (Cloverleaf model)
>WENV170651939	Met	CAT
                   c      ACCA ttgacacgtc
                     G - C
                     G   A
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     C G A C C     A
      C G A        A      | | | | |     G
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G + T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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