The detailed information of tRNA gene sequence


Sequence ID>WENV170651943
Genome IDJRYG01018972
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 966
End posion on genome 1038
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ccttcaaaat
tRNA gene sequence 
GGTCCCGTAGTTCAACGGATAGAATAGGAGTTTCCTAAACTCTTGATCCTGGTTCGATTC
CAGGCGGGACTACtt
Downstream region at tRNA end position 
ttttttctcc
Secondary structure (Cloverleaf model)
>WENV170651943	Arg	CCT
                   t      ACtt ttttttctcc
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     G G A C C     A
      C A A        A      | | | | |     G
    G       C T T G       C C T G G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     TGAT
                    G + T
                    G - C
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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