The detailed information of tRNA gene sequence


Sequence ID>WENV170651951
Genome IDJRYG01020566
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 139
End posion on genome 66
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gaagggcatc
tRNA gene sequence 
GCCACCTTAGCTCAATCGGCAGAGCAACCGCTTCGTAAGTGGTAGGTTTCGAGTTCAACT
CTCGAAGGTGGCTCac
Downstream region at tRNA end position 
aaaacggccg
Secondary structure (Cloverleaf model)
>WENV170651951	Thr	CGT
                   c      TCac aaaacggccg
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A          T C
                    T     A G C T C     A
      T A A        A      | | | | |     A
    C       C T C G       T C G A G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    A - T
                    C - G
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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