The detailed information of tRNA gene sequence


Sequence ID>WENV170651952
Genome IDJRYG01020886
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1051
End posion on genome 962
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agcttggttt
tRNA gene sequence 
GGAGGGGTGACGGAGTGGCCGAACGTGCCGGTCTTGAAAACCGGAGATGGGGCAACCCAT
CCGCGAGTTCAAATCTCGCCCCCTCCGCCA
Downstream region at tRNA end position 
aaccggaata
Secondary structure (Cloverleaf model)
>WENV170651952	Ser	TGA
                   t      GCCA aaccggaata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        G      | | | | |     A
    G       G G C A       G C G A G     C
    G         | | |                 T T
    C       A C G T
      C G A        G     AGATGGGGCAACCCATCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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