The detailed information of tRNA gene sequence


Sequence ID>WENV170651972
Genome IDJRYG01024326
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1246
End posion on genome 1172
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcaaaacacc
tRNA gene sequence 
GGGCCTATAGCTCAGACGGTTAGAGCACCTGACTCATAATCAGGTGGTCCCTGGTTCGTT
CCCAGGTGGGCCCACtc
Downstream region at tRNA end position 
ttttggaggt
Secondary structure (Cloverleaf model)
>WENV170651972	Met	CAT
                   c      ACtc ttttggaggt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          C T
                    T     G G A C C     T
      A G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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