The detailed information of tRNA gene sequence


Sequence ID>WENV170651990
Genome IDJRYG01031096
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1378
End posion on genome 1454
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcagttgnn
tRNA gene sequence 
GGCTACGTAGCTCAGGCGGTTAGAGCACGGCACTCATAATGCCGGTGTCGGTGGTTCAAG
TCCACCCGTAGCCACCA
Downstream region at tRNA end position 
ttaaatcaag
Secondary structure (Cloverleaf model)
>WENV170651990	Met	CAT
                   n      ACCA ttaaatcaag
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     G - C          T G
                    T     C C A C C     A
      G G A        A      | | | | |     A
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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