The detailed information of tRNA gene sequence


Sequence ID>WENV170652004
Genome IDJRYG01038215
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 163
End posion on genome 248
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aattaaatat
tRNA gene sequence 
GGAGGTGTCGCATAGAGGTCTAGTGCACTCGCTTGGAAAGCGAGCAGGGATAATACCCTC
GCGAGTTCGAATCTCGCCACCTCCGCac
Downstream region at tRNA end position 
tggcaattta
Secondary structure (Cloverleaf model)
>WENV170652004	Ser	GGA
                   t      GCac tggcaattta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G C T C     A
      A G A        C      | | | | |     G
    G       T A C G       G C G A G     C
    G       + | | |                 T T
    T       G T G C
      C T A        A     CAGGGATAATACCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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