The detailed information of tRNA gene sequence


Sequence ID>WENV170652005
Genome IDJRYG01038441
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1142
End posion on genome 1066
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tcgcggccct
tRNA gene sequence 
CGGAGTGTAGCTCAGCCTGGTAGAGCACTGCGTTCGGGACGCAGGGGTCGCATGTTCGAA
TCATGTCACTCCGACCA
Downstream region at tRNA end position 
ttgacatcaa
Secondary structure (Cloverleaf model)
>WENV170652005	Pro	CGG
                   t      ACCA ttgacatcaa
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T G T A C     A
      C G A        A      + | | | |     G
    C       C T C G       G C A T G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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