The detailed information of tRNA gene sequence


Sequence ID>WENV170652011
Genome IDJRYG01040060
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 235
End posion on genome 160
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgacacttct
tRNA gene sequence 
AGGCCAGTGGCTCAATTGGCAGAGCTCTCGTCTCCAAAACGAGCGGTTGTGGGTTCAAGT
CCTACCTGGCCTGCCT
Downstream region at tRNA end position 
taggcaacgc
Secondary structure (Cloverleaf model)
>WENV170652011	Trp	CCA
                   t      GCCT taggcaacgc
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C A T C C     A
      T A A        G      | | + | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          T     CGGTT
                    C - G
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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