The detailed information of tRNA gene sequence


Sequence ID>WENV170652015
Genome IDJRYG01041659
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 229
End posion on genome 305
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgtctcttt
tRNA gene sequence 
GGCGGGATAGCTCAGTTGGTTAGAGCCGCGGAATCATAATCCGTAGGTCCCCGGTTCAAG
TCCGGGTCCCGCTACCA
Downstream region at tRNA end position 
tcgcttccct
Secondary structure (Cloverleaf model)
>WENV170652015	Met	CAT
                   t      ACCA tcgcttccct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     G G G C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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