The detailed information of tRNA gene sequence


Sequence ID>WENV170652022
Genome IDJRYG01044643
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 531
End posion on genome 438
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcatattcag
tRNA gene sequence 
GGAAGAGTGGCCGAGCCTGGTTGAAGGCGCACGACTCGAAATCGTGTAAGCAGTTTACGC
TGCTTCGTGGGTTCAAATCCCACCTCTTCCGCCA
Downstream region at tRNA end position 
caaatttaca
Secondary structure (Cloverleaf model)
>WENV170652022	Ser	CGA
                   g      GCCA caaatttaca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     A
  T         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TAAGCAGTTTACGCTGCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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