The detailed information of tRNA gene sequence


Sequence ID>WENV170652023
Genome IDJRYG01044858
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 259
End posion on genome 334
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gatttgattc
tRNA gene sequence 
AGGGGTATAGTGTTAACGGTTAGCACGTGGGTCTCCAAAACCTAAAGTTCGGGTTCGAAT
CCTGATACCCCTGCCA
Downstream region at tRNA end position 
gtttcctgaa
Secondary structure (Cloverleaf model)
>WENV170652023	Trp	CCA
                   c      GCCA gtttcctgaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     A G T C C     A
      A A T        A      | | + | |     G
    C       T G T G       T C G G G     C
    G       + | | |                 T T
    G       G C A C
      T T A        G     AAGT
                    T - A
                    G + T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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