The detailed information of tRNA gene sequence


Sequence ID>WENV170652033
Genome IDJRYG01050735
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1292
End posion on genome 1217
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cagccatccc
tRNA gene sequence 
GCTCCCTTCGTCTAGTGGCCCAGGACACCGCCCTCTCACGGCGGGAACAGGGGTTCGAAA
CCCCTAGGGAGCGCCA
Downstream region at tRNA end position 
ataaaatcaa
Secondary structure (Cloverleaf model)
>WENV170652033	Glu	CTC
                   c      GCCA ataaaatcaa
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          A A
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        A     GAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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