The detailed information of tRNA gene sequence


Sequence ID>WENV170652039
Genome IDJRYG01054060
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 966
End posion on genome 879
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gggggcgttc
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTCGATTGCGACGGTCTTGAAAACCGTTGACCCGCGAGGGTCC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ggatttcaat
Secondary structure (Cloverleaf model)
>WENV170652039	Ser	TGA
                   c      GCCA ggatttcaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACCCGCGAGGGTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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