The detailed information of tRNA gene sequence


Sequence ID>WENV170652046
Genome IDJRYG01057994
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3412
End posion on genome 3489
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctaacctcac
tRNA gene sequence 
GGTCCCATCGTCTAGCCTGGCCTAGGACGGAGCCCTCTCAAGGCTCAGACACGGGTTCGA
ATCCCGTTGGGACCACCA
Downstream region at tRNA end position 
aaccgcactt
Secondary structure (Cloverleaf model)
>WENV170652046	Glu	CTC
                   c      ACCA aaccgcactt
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
    C C G A        C      | | | | |     G
  T         T C T G       A C G G G     C
  G         + | | |                 T T
  G         G G A C
    C C T A        G     AGAC
                    G - C
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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