The detailed information of tRNA gene sequence


Sequence ID>WENV170652060
Genome IDJRYG01063408
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 869
End posion on genome 945
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atatcattat
tRNA gene sequence 
GGCAGCGTAGCTCAGTTGGTTAGAGCGCAGGACTCATAAGCCTGAGGTCACTGGTTCAAT
CCCAGTCGCTGCTACCA
Downstream region at tRNA end position 
tataacaccc
Secondary structure (Cloverleaf model)
>WENV170652060	Met	CAT
                   t      ACCA tataacaccc
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          C T
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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