The detailed information of tRNA gene sequence


Sequence ID>WENV170652085
Genome IDJRYG01078226
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 376
End posion on genome 302
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttccgccat
tRNA gene sequence 
CCGAGGGTAGCTTAATGGTAGAGCACAAGTGTCATGAGCTTGGAGATGTGCGTTCGACTC
GCACCCCTCGTACCA
Downstream region at tRNA end position 
attcaaagga
Secondary structure (Cloverleaf model)
>WENV170652085	Met	CAT
                   t      ACCA attcaaagga
                     C   T
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T C
                    T     C A C G C     A
        A A        A      | | | | |     G
      T     T T C G       G T G C G     C
      G     + | | |                 T T
      G     G A G C
        T A        A     GAGAT
                    C - G
                    A - T
                    A - T
                    G - C
                    T + G
                  G       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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