The detailed information of tRNA gene sequence


Sequence ID>WENV170652087
Genome IDJRYG01080247
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 241
End posion on genome 316
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accatccacc
tRNA gene sequence 
GGGCCCGTAGCTCAACGGTTAGAGCTGGCCGCTCATAACGGTCTGGTCGCTGGTTCGAAT
CCGGCCGGGCCCACCA
Downstream region at tRNA end position 
cgaaaccgag
Secondary structure (Cloverleaf model)
>WENV170652087	Met	CAT
                   c      ACCA cgaaaccgag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G G C C     A
      C A A        A      | | + | |     G
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     TGGTC
                    G - C
                    G + T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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