The detailed information of tRNA gene sequence


Sequence ID>WENV170652108
Genome IDJRYG01093800
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 240
End posion on genome 336
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aaaataacct
tRNA gene sequence 
GGAAGGGCGGCGTCATCCGGTGAGGCGGCCGGACTTCAAATCCGGTGGGGGCCGTCAGGC
GGTCCTTGGTGGGTTCGACTCCCACGCCCTTCCGCCA
Downstream region at tRNA end position 
cataaacacc
Secondary structure (Cloverleaf model)
>WENV170652108	SeC(p)	TCA
                   t      GCCA cataaacacc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T C
                    G     C A C C C     A
      C T A        G      | | | | |     G
    C       C T G C       G T G G G     C
    G       | + | |                 T T
    G       G G C G
      T G A        G     TGGGGGCCGTCAGGCGGTCCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK