The detailed information of tRNA gene sequence


Sequence ID>WENV170652120
Genome IDJRYG01111769
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 145
End posion on genome 69
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tccggcgagt
tRNA gene sequence 
GGCGGATTAGCTCAGTCGGTTAGAGCAGAGGAATCATAATCCTTTTGTCGGGGGTTCGAA
TCCCTCCTTCGCTACCA
Downstream region at tRNA end position 
ttccaatcgc
Secondary structure (Cloverleaf model)
>WENV170652120	Met	CAT
                   t      ACCA ttccaatcgc
                     G + T
                     G - C
                     C - G
                     G - C
                     G + T
                     A - T
                     T   C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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