The detailed information of tRNA gene sequence


Sequence ID>WENV170652121
Genome IDJRYG01113630
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 99
End posion on genome 189
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
aatagtttaa
tRNA gene sequence 
GCGGATGTGGTGGAATTGGTAGACACGCAAGCTTGAGGGGCTTGTGCCCAATATATCGGG
CGTGGAAGTTCGAGTCTTCTCATCCGCACCA
Downstream region at tRNA end position 
attatgaaca
Secondary structure (Cloverleaf model)
>WENV170652121	Leu	GAG
                   a      ACCA attatgaaca
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C T T C     A
      T A A        G      + | | | |     G
    T       G G T G       G G A A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCCCAATATATCGGGCGT
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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